miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000001
species: Persea americana
miRNA family: MIRf920
source: miRNEST

Taxonomy by NCBI:
Persea americana Persea Lauraceae Laurales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACGAGTCAAGTGATGGGTCTT

miRNA*
GGCTTTAACTTGATATCGTGT

mismatches: 2
bulges: 2

View larger
pre-miRNA
GAATATGTTAAGGGCTTTAACTTGATATCGTGTACCTGAAATCTAGAATGTCGTTTAGCTTCAAGGGCACCAACTCACTTCCAAATTCCGACATTCGGGT
TTCAAGTACACACGAGTCAAGTGATGGGTCTTTGCATATGC


dot-bracket secondary structure
..((((((.((((((((..(((((((.((((((((.((((((((.((((((((...........(((......)))............))))))))))))
)))).))..)))))))))))))...))))))))))))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;