ABOUT THIS RECORDspecies: Adiantum capillus-veneris
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Adiantum capillus-veneris Adiantum Pteridaceae Polypodiales Polypodiopsida Moniliformopses Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATGTTCATCATCATCCTGT miRNA* AGGGTGACCTGGACAAGATG mismatches: 5 bulges: 1 |
pre-miRNA
TTGTTGCATCATCATGTTCATCATCATCCTGTCCCACAATGCGGTCAAAAGAATCATCAAAGCTGCAGCTCTTCTCAAAAGAAGGGCAGTTCTCTAATCC
ATTGTCAGAACCTGTTGTCTCACTGCCAGTAACTTTGTCAACGGAAGAGCCATGGCTCGACACTCTGCAAACTCTTGCATTCCAATATTCTTTCTCACAT
GCAGAGGAGTTTCTGGGTATCTGACTTGCACCAAATCTATAACCTTCAGTGCCTAATACTTCTGATTCTTGAATGTTTGATAAAGGGTGACCTGGACAAG
ATGATCTCCGA
dot-bracket secondary structure
.......((((((.((((((...(((((((..........(((.(((..(((((((((..(((((..((((((((..((((...((((((....((((..
.............))))....)))))).....))))......))))))))..))))).))..(((((((..............................)
))))))((((...((((((.((((.....................))))))))))..)))).)))))))))).))).......)))))))..)))))).)
)))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTGTTGCATCATCATGTTCATCATCATCCTGTCCCACAATGCGGTCAAAAGAATCATCAAAGCTGCAGCTCTTCTCAAAAGAAGGGCAGTTCTCTAATCC
ATTGTCAGAACCTGTTGTCTCACTGCCAGTAACTTTGTCAACGGAAGAGCCATGGCTCGACACTCTGCAAACTCTTGCATTCCAATATTCTTTCTCACAT
GCAGAGGAGTTTCTGGGTATCTGACTTGCACCAAATCTATAACCTTCAGTGCCTAATACTTCTGATTCTTGAATGTTTGATAAAGGGTGACCTGGACAAG
ATGATCTCCGA
dot-bracket secondary structure
.......((((((.((((((...(((((((..........(((.(((..(((((((((..(((((..((((((((..((((...((((((....((((..
.............))))....)))))).....))))......))))))))..))))).))..(((((((..............................)
))))))((((...((((((.((((.....................))))))))))..)))).)))))))))).))).......)))))))..)))))).)
)))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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