ABOUT THIS RECORDspecies: Agrostis stolonifera
miRNA family: MIRf89
source: miRNEST
Taxonomy by NCBI:
Agrostis stolonifera Agrostis Agrostidinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGGAGCTTTAGTCCCGGTTC miRNA* ACCGGGGACTAATGCTCCTGGC mismatches: 2 bulges: 1 |
pre-miRNA
GTGGTATCCAGTGGTGGGACCAGGAGCTTTAGTCCCGGTTCTAGGTTGACCGGGGACTAATGCTCCTGGCCCAAAGATCGTTTTTCC
dot-bracket secondary structure
.(((...)))....((((.((((((((.((((((((((((.......)))).)))))))).))))))))))))..............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTGGTATCCAGTGGTGGGACCAGGAGCTTTAGTCCCGGTTCTAGGTTGACCGGGGACTAATGCTCCTGGCCCAAAGATCGTTTTTCC
dot-bracket secondary structure
.(((...)))....((((.((((((((.((((((((((((.......)))).)))))))).))))))))))))..............
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
