ABOUT THIS RECORDspecies: Antirrhinum majus
miRNA family: MIR1426
source: miRNEST
Taxonomy by NCBI:
Antirrhinum majus Antirrhinum Antirrhineae Plantaginaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAATGTTGATGATGATTATA miRNA* TGATCTCATCTATTATTCTCT mismatches: 3 bulges: 2 |
pre-miRNA
CATCGCCTCAGGTGATCTCATCTATTATTCTCTCGCTTCGTGTTCCCAAAATACCCCTCCCCCGGAACCCGTATCTACGATAAAACCAGATAACATGGAT
ACTACTGAAAACCCTAATTCGGATTCTCCGGTTTTGGATTCTGTAATGGAACCTGAGGACGAGAATGTTGATGATGATTATAATAACAGTG
dot-bracket secondary structure
.((((((...)))))).(((((...(((((((...(((((.(((((.....(((...(((.(((((....(((((((..................)))))
))..(((((........)))))....)))))....)))....)))..))))).)))))..)))))))..))))).................
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CATCGCCTCAGGTGATCTCATCTATTATTCTCTCGCTTCGTGTTCCCAAAATACCCCTCCCCCGGAACCCGTATCTACGATAAAACCAGATAACATGGAT
ACTACTGAAAACCCTAATTCGGATTCTCCGGTTTTGGATTCTGTAATGGAACCTGAGGACGAGAATGTTGATGATGATTATAATAACAGTG
dot-bracket secondary structure
.((((((...)))))).(((((...(((((((...(((((.(((((.....(((...(((.(((((....(((((((..................)))))
))..(((((........)))))....)))))....)))....)))..))))).)))))..)))))))..))))).................
SIMILARITIES| miRBase no hits PMRD no hits microPC miR1426: 3e-92 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR1426 from microPC (MNEST046768) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
