ABOUT THIS RECORDspecies: Antirrhinum majus
miRNA family: MIRf1541
source: miRNEST
Taxonomy by NCBI:
Antirrhinum majus Antirrhinum Antirrhineae Plantaginaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGTTGTTCGACGAAATGCCT miRNA* AACGTTGTGTCGTGGACTGCT mismatches: 4 bulges: 2 |
pre-miRNA
GGGGATATTGCAAATGGTGTGCAGTTGTTCGACGAAATGCCTGAGAGGAACGTTGTGTCGTGGACTGCTCTCATTGCGGGGTTTGTG
dot-bracket secondary structure
..((((.((((((.(((...((((((...(((((.((((.((....))..)))).)))))..))))))..))))))))).))))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGGGATATTGCAAATGGTGTGCAGTTGTTCGACGAAATGCCTGAGAGGAACGTTGTGTCGTGGACTGCTCTCATTGCGGGGTTTGTG
dot-bracket secondary structure
..((((.((((((.(((...((((((...(((((.((((.((....))..)))).)))))..))))))..))))))))).))))...
SIMILARITIES| miRBase no hits PMRD osa-miRf10734-akr: 0.0003 microPC no hits | UniProt sp|Q9ZUT4|PP192_ARATH: 0.00005 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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