miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000054
species: Aquilegia formosa x Aquilegia pubescens
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCTTCATCATCATCTTCT

miRNA*
 AAGATGATGTTGAAATTGATT

mismatches: 4
bulges: 0
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pre-miRNA
 AACGTTATACTTCATCTTCATCATCATCTTCTACTTCAATTCAACCAAGTTCTCCATCTGAAATTCTTCGTGGATTTGAGAAAATCAAACGGTTAGAAAT
TGAATTACCTTCTGGAGATCTACGTTTAGAAAAAGGTACAGTGTTAAGATGGAAAGCAGAGTTTGGTAAATCTTTGAAAGGTTGTGTAATACTTGCTATT
CGTTCAATTGAAACTAATGGTGGAGATTGTAACAATGAAGATGATGTTGAAATTGATTTTAATGGT

dot-bracket secondary structure
..(((((....(((..((((.((((((((((.....(((((..((((.(((.(((((((.((.((((((((.(((((....)))))..))))..))))((
((...(((((((((((........))))))...))))))))).)).))))))).)))..(((((....(((...((((.(((.(((...)))..))).))
))....))).)))))..))))...))))).......)))))))))).))))..)))...)))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q9C9S2|FB91_ARATH: 0.0000000000006

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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