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ABOUT THIS RECORD

ID: MNEST000055
species: Aquilegia formosa x Aquilegia pubescens
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCTGGCTCCCTGTATGCCA

miRNA*
 GCGTGCGAGGAGCCATGCATA

mismatches: 2
bulges: 0
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pre-miRNA
 GTCTATCATGTATGCCTGGCTCCCTGTATGCCATTTGCTTAGTCCATTTAGTATTAGATGGCCTTTGTGGATGGCGTGCGAGGAGCCATGCATATTGTTGT
G

dot-bracket secondary structure
).....((.((((((.(((((((.((((((((((((((..((.(((((((....))))))).))..)))))))))))))).))))))).))))))...)).
.


SIMILARITIES
miRBase aqc-MIR160b: 3.0E-41

PMRD aqc-miR160b: 3.0E-41

microPC miR160: 5.0E-40		UniProt no hits

RFAM 0mir-160: 2.0E-11		most similar mature miRNAs

Identical with: aqc-miR160b from PMRD (MNEST046865), miR160 from microPC , aqc-MIR160b from miRBase , miR160 from microPC

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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