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ABOUT THIS RECORD
ID:
MNEST000080
species:
Arachis duranensis
miRNA family:
miR162
source:
miRNEST
Taxonomy by NCBI:
Arachis duranensis
Arachis
Dalbergieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGAGGCAACGGTTCATCGAT
miRNA*
CGATAAACCTCTGCATCCAGC
mismatches:
4
bulges:
0
View larger
pre-miRNA
ATTAGCGTATGAATTTGTAAGGTGAAGTCAC
TGGAGGCAACGGTTCATCGAT
CTCTTCCTGAATTTGGCTGTGGAATCATACACAAAGCAAGAATCGGT
C
GATAAACCTCTGCATCCAGC
GCTCACTTTGCCTCTTTTTCGTGTTTTT
dot-bracket secondary structure
....(((...(((...(((((((((.((..(
((((.(((..((((.((((((
(..(((.((..((((..((((....))))..)))).)).)))..)))
)
))).))))..))).))))).
)))))))))))....))).)))......
SIMILARITIES
miRBase
vvi-MIR162
:
0.000000000000002
PMRD
vvi-miR162
:
0.000000000000002
microPC
miR162
:
2e-31
UniProt
no hits
RFAM
MIR162_2: 0.0000000006
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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