ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR166
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCC miRNA* AATGTTGGCTGGCTCGAGG mismatches: 2 bulges: 2 |
pre-miRNA
TGTTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAAATGAAGGTTCTCACTCACTCACTCATCATATTTTGGGAGATGAAGTAGTAGAACTAT
TAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAATA
dot-bracket secondary structure
.....((((((((((((..((((((.(((((((((((((.....))).((((((.(((.((((((((.(((.....)))))).)).))))))))))))..
.)))))))))).))).))).))))))))))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGTTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAAATGAAGGTTCTCACTCACTCACTCATCATATTTTGGGAGATGAAGTAGTAGAACTAT
TAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAATA
dot-bracket secondary structure
.....((((((((((((..((((((.(((((((((((((.....))).((((((.(((.((((((((.(((.....)))))).)).))))))))))))..
.)))))))))).))).))).))))))))))))....
SIMILARITIES| miRBase ptc-MIR166f: 0.0000000000005 PMRD ptc-miR166f: 0.0000000000005 microPC miR166: 0.0000000000005 | UniProt no hits RFAM mir-166: 0.00000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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