ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR168
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGCTTGGTGCAGGTCGGGAA miRNA* CCCGCCTTGCATCAAATGAAT mismatches: 3 bulges: 0 |
pre-miRNA
TGCGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGATCTTCCCGCGCGTAATGGATGCCGTTGGCGGCGGCGAATTTGGATCCCGCCTTGCATCAA
ATGAATCGGAGGCCACGG
dot-bracket secondary structure
..((.(((((((.(((((.((((((((((.(((((.((((..(((((((((.((((((...)))))))).)))).))).)))).))))).))))))))))
.))))).))))))).)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGCGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGATCTTCCCGCGCGTAATGGATGCCGTTGGCGGCGGCGAATTTGGATCCCGCCTTGCATCAA
ATGAATCGGAGGCCACGG
dot-bracket secondary structure
..((.(((((((.(((((.((((((((((.(((((.((((..(((((((((.((((((...)))))))).)))).))).)))).))))).))))))))))
.))))).))))))).)).
SIMILARITIES| miRBase gma-MIR168: 3e-20 PMRD gma-miR168: 3e-20 microPC miR168: 0.00000009 | UniProt no hits RFAM MIR168: 0.000000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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