ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIRf968
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGTAAAGCTCAGGAGGGATA miRNA* TCCATCCTGAGTTTCATGGGT mismatches: 2 bulges: 0 |
pre-miRNA
TTAATATGGTGTGGAAGAATCTGTAAAGCTCAGGAGGGATAGCGCCACGAAAGCATCGGCGATGATCCGTTGTTTGTGAAGAGTTTTTATGCTCTTTGAT
TTTCTGTAGCGCTATCCATCCTGAGTTTCATGGGTTCTTCACACTGCTTCTA
dot-bracket secondary structure
.......((((((.((((((((((.((((((((((.(((((((((.(((((((((.(((((......)))))..)))(((((((......)))))))...
)))).)).))))))))).)))))))))).)))))))))))))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAATATGGTGTGGAAGAATCTGTAAAGCTCAGGAGGGATAGCGCCACGAAAGCATCGGCGATGATCCGTTGTTTGTGAAGAGTTTTTATGCTCTTTGAT
TTTCTGTAGCGCTATCCATCCTGAGTTTCATGGGTTCTTCACACTGCTTCTA
dot-bracket secondary structure
.......((((((.((((((((((.((((((((((.(((((((((.(((((((((.(((((......)))))..)))(((((((......)))))))...
)))).)).))))))))).)))))))))).)))))))))))))))).......
SIMILARITIES| miRBase bna-MIR390b: 0.000000000002 PMRD bna-miR390b: 0.000000000002 microPC miR390: 0.000008 | UniProt no hits RFAM MIR390: 0.000000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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