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ABOUT THIS RECORD
ID:
MNEST000113
species:
Arachis hypogaea
miRNA family:
miR3509-3p
source:
miRNEST
Taxonomy by NCBI:
Arachis hypogaea
Arachis
Dalbergieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATCTAACGACTCTTAGATATC
miRNA*
TATTTGATAGCCATTAGATGA
mismatches:
4
bulges:
0
View larger
pre-miRNA
ACCTGTCAACAGGTTAATGTATACTTAATTGAATTGTTTAATGGTGAAAATTTCAGGTGCAATCGACTTCACATGAAGTTGA
TATTTGATAGCCATTAGA
TGA
TTTGACTGATTTAACTAAATTTTT
ATCTAACGACTCTTAGATATC
AACTTCACGTGAAGTCGATTTCACGTGAGTTTTCATCTTGTTTAATACATTT
GATAAGTTAAAATATATTGAAAAGAGT
dot-bracket secondary structure
(((((....)))))(((((((((((((.((((((...((((.((((((((((.((.(((.((((((((((((.(((((((((
(((((((.((...(((((
(((
.......(((((....))))).))
))))))...)).)))))))))
))))))).)))))))))))).))).))))))))))))....))))...))))
)))))))....))))))))........
SIMILARITIES
miRBase
ahy-MIR3509
:
2e-29
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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