ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: miR162
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGGCAGCGGTTCATCGAT miRNA* CGATAAACCTCTGCATCCAGC mismatches: 3 bulges: 0 |
pre-miRNA
TATTAGCGTATGAATTTGTAAGGTGAAGTCACTGGAGGCAGCGGTTCATCGATCTCTTCCTGAATTTGGCTGTGGAGTCATACACAAAGCAAGAATCGGTC
GATAAACCTCTGCATCCAGCGCTCACTTTGCCTCTTTTTCGTGTTTTT
dot-bracket secondary structure
)....(((...(((...(((((((((.((..(((((.((((.((((.(((((((..(((.((..((((..((((....))))..)))).)).)))..))))
))).)))).)))).))))).)))))))))))....))).)))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TATTAGCGTATGAATTTGTAAGGTGAAGTCACTGGAGGCAGCGGTTCATCGATCTCTTCCTGAATTTGGCTGTGGAGTCATACACAAAGCAAGAATCGGTC
GATAAACCTCTGCATCCAGCGCTCACTTTGCCTCTTTTTCGTGTTTTT
dot-bracket secondary structure
)....(((...(((...(((((((((.((..(((((.((((.((((.(((((((..(((.((..((((..((((....))))..)))).)).)))..))))
))).)))).)))).))))).)))))))))))....))).)))......
SIMILARITIES| miRBase vvi-MIR162: 8.0E-18 PMRD vvi-miR162: 8.0E-18 microPC miR162: 2.0E-31 | UniProt no hits RFAM 2MIR162_2: 4.0E-11 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
