ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: miR166d
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAATGTTGTCTGGCTCGAGA miRNA* TCGGACCAGGCTTCATTCCCC mismatches: 3 bulges: 0 |
pre-miRNA
ATAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCAAAGTGTCTAATAATCTCGGACC
AGGCTTCATTCCCCCCATCCAA
dot-bracket secondary structure
)...((.((...((((((..((((((.((((((....(((((((...(((...(((.((((((.......)))))).))).))).))))))))))))).))
))))..))))))...)).))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCAAAGTGTCTAATAATCTCGGACC
AGGCTTCATTCCCCCCATCCAA
dot-bracket secondary structure
)...((.((...((((((..((((((.((((((....(((((((...(((...(((.((((((.......)))))).))).))).))))))))))))).))
))))..))))))...)).))..
SIMILARITIES| miRBase ptc-MIR166q: 2.0E-9 PMRD pvu-miR166: 2.0E-9 microPC miR166: 4.0E-7 | UniProt no hits RFAM 6mir-166: 1.0E-7 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
