ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTT miRNA* GATCATGTGGCAGTTTCACC mismatches: 1 bulges: 1 |
pre-miRNA
ATGATCATGCACCACTACAAGTTGAAGCTGCCAGCATGATCTTAACTTTCCCTCTCCTATGATTTGTTGGGGTGAGATCAGATCATGTGGCAGTTTCACCT
AGTTGTTGGAAGCATGA
dot-bracket secondary structure
)...((((((.((((.((.((.(((((((((((.((((((((....((((...((((.((.....)).)))).))))..))))))))))))))))))).))
.)).).)))..))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGATCATGCACCACTACAAGTTGAAGCTGCCAGCATGATCTTAACTTTCCCTCTCCTATGATTTGTTGGGGTGAGATCAGATCATGTGGCAGTTTCACCT
AGTTGTTGGAAGCATGA
dot-bracket secondary structure
)...((((((.((((.((.((.(((((((((((.((((((((....((((...((((.((.....)).)))).))))..))))))))))))))))))).))
.)).).)))..))))))
SIMILARITIES| miRBase ahy-MIR167: 2.0E-61 PMRD vvi-miR167e: 2.0E-9 microPC miR167: 1.0E-37 | UniProt no hits RFAM 1MIR167_1: 2.0E-12 | most similar mature miRNAs |
Identical with: miR167 from microPC (MNEST044797) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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