ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: miR156b-3p
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTCTCTAAGCTTCTGTCATC miRNA* TGACAGAAGATAGAGAGCAC mismatches: 3 bulges: 1 |
pre-miRNA
ACACTATTGGTAGAGTTGTTGACAGAAGATAGAGAGCACAAAAGATGATATGCATATAGATATATAGTCACATACATACACATATGGATGGATCAAAAGCC
AATTGCATTTTATTTCTTTGTGCTCTCTAAGCTTCTGTCATCACTCTTCAGCCTCCA
dot-bracket secondary structure
).......((((((((...(((((((((.(((((((((((((((((((.(((((............(((.(((.((((....)))).))))))........
...))))).)))))).)))))))))))))..)))))))))..)))))...)))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACACTATTGGTAGAGTTGTTGACAGAAGATAGAGAGCACAAAAGATGATATGCATATAGATATATAGTCACATACATACACATATGGATGGATCAAAAGCC
AATTGCATTTTATTTCTTTGTGCTCTCTAAGCTTCTGTCATCACTCTTCAGCCTCCA
dot-bracket secondary structure
).......((((((((...(((((((((.(((((((((((((((((((.(((((............(((.(((.((((....)))).))))))........
...))))).)))))).)))))))))))))..)))))))))..)))))...)))....
SIMILARITIES| miRBase ahy-MIR156b: 7.0E-31 PMRD mtr-miR156e: 1.0E-13 microPC miR157: 8.0E-9 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
