miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000131
species: Arachis hypogaea
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCTGCTAAGCTATGGATCCC

miRNA*
 ATTCCATATCCTGGGAGCTTC

mismatches: 4
bulges: 2
View larger
pre-miRNA
 GGTTTGGATGTGGAAGGTGGTGATGAGTGGAGCTCCTTGAAGTCCAACAGAGGGTCTTGGTGGGTGGATTGAGCTGCTAAGCTATGGATCCCACAGTACT
ACCCATATATACCCCATTATGCAGTGGTAGTTCTGCGGATTCCATATCCTGGGAGCTTCATTACCTTTCCACAGATCCTTATTTGGATTGAAGGGAGCTC
TACATAGCATCCTCTTTCTAATTAACT

dot-bracket secondary structure
((((..(((..((((((.((((.((.((((((((((((..(((((((..(((((((((((.((((((...(((((.((.((.((((((..((.(((.(((
(((....((((......))))....)))))).))).))..))))))..)).)))))))..))))))..))).))))))))..)))))))..)))))))))
))).)).)))).))))))..)))))))


SIMILARITIES
miRBase ahy-MIR159: 4e-107

PMRD pvu-miR159: 6e-23

microPC miR159: 2e-96		UniProt no hits

RFAM MIR159: 1e-21		most similar mature miRNAs

Identical with: miR159 from microPC (MNEST045397)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;