ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: MIR160
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCCTGGCTCCCTGTATGCCAT miRNA* GGCGTGCGAGGAGCCATGCAT mismatches: 2 bulges: 0 |
pre-miRNA
CATACTTGGTGTGCCTGGCTCCCTGTATGCCATTTGTAGAGCTCGTCAAAACATTGACAGCCTTAACAAATGGCGTGCGAGGAGCCATGCATGCTGTCTG
T
dot-bracket secondary structure
...((.((((((((.(((((((.((((((((((((((.(((((.(((((....))))))).))).)))))))))))))).))))))).))))))))...)
)
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CATACTTGGTGTGCCTGGCTCCCTGTATGCCATTTGTAGAGCTCGTCAAAACATTGACAGCCTTAACAAATGGCGTGCGAGGAGCCATGCATGCTGTCTG
T
dot-bracket secondary structure
...((.((((((((.(((((((.((((((((((((((.(((((.(((((....))))))).))).)))))))))))))).))))))).))))))))...)
)
SIMILARITIES| miRBase mtr-MIR160: 0.000000000000001 PMRD gma-miR160a: 0.0000000000003 microPC miR160: 3e-16 | UniProt no hits RFAM mir-160: 0.00000000009 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
