ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCATCTTCATCATCAACGTCA miRNA* GCGTGAATGGCACAGAGGTT mismatches: 5 bulges: 1 |
pre-miRNA
TGGCATAATGGTGACTCTCTTGGCGTGAATGGCACAGAGGTTAGTGTCCTCAAACAACCCAACCAGGTAAGCCTCCGCGGCTTCCTGGAGAGCCGCCACA
GCGCTGCTCTGGAACCTGAGGTCGGTCTTGAGCAACAACCATCTTCATCATCAACGTCATGCACCATCTTCAGGAACC
dot-bracket secondary structure
.......((((((.......((((((..((((...(((((((.((...(((((((.(((((.(((((..(((((..(((((((......)))))))...)
).)))..)))))....)).)))..)).)))))..)))))).)))...))))..))))))..))))))...........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TGGCATAATGGTGACTCTCTTGGCGTGAATGGCACAGAGGTTAGTGTCCTCAAACAACCCAACCAGGTAAGCCTCCGCGGCTTCCTGGAGAGCCGCCACA
GCGCTGCTCTGGAACCTGAGGTCGGTCTTGAGCAACAACCATCTTCATCATCAACGTCATGCACCATCTTCAGGAACC
dot-bracket secondary structure
.......((((((.......((((((..((((...(((((((.((...(((((((.(((((.(((((..(((((..(((((((......)))))))...)
).)))..)))))....)).)))..)).)))))..)))))).)))...))))..))))))..))))))...........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P08437|H3_VOLCA: 0.000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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