ABOUT THIS RECORDspecies: Arachis ipaensis
miRNA family: MIRf968
source: miRNEST
Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGTTAAACTCAGGAGGGATA miRNA* TCTATCCAGAGTTTCACGGCT mismatches: 3 bulges: 0 |
pre-miRNA
AATTAATAAGGTAGAATCTGTTAAACTCAGGAGGGATAGCGCCACATATAACACAATTCATTCGTATTGGCGCTATCTATCCAGAGTTTCACGGCTTCTTC
TTACTTTA
dot-bracket secondary structure
).....(((((.((((.((((.((((((.(((.(((((((((((.((((..............))))))))))))))).))).)))))).)))).))))))
))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AATTAATAAGGTAGAATCTGTTAAACTCAGGAGGGATAGCGCCACATATAACACAATTCATTCGTATTGGCGCTATCTATCCAGAGTTTCACGGCTTCTTC
TTACTTTA
dot-bracket secondary structure
).....(((((.((((.((((.((((((.(((.(((((((((((.((((..............))))))))))))))).))).)))))).)))).))))))
))).....
SIMILARITIES| miRBase vvi-MIR390: 5.0E-9 PMRD vvi-miR390: 5.0E-9 microPC miR390: 0.0003 | UniProt no hits RFAM 0MIR390: 2.0E-8 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
