ABOUT THIS RECORDspecies: Arachis ipaensis
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGGGGGGACTGGGAAGGAA miRNA* TCTTCCCTACACCTCCCATACC mismatches: 4 bulges: 1 |
pre-miRNA
TGGTGAATGAATGGAAAAGGGAGACAAGATTAGGGGAAGGCGTTGGTATGGGGGGACTGGGAAGGAATGAATGAATGAATGAAGTCATGTGATTTGTGCC
TTCAATGCTTCTTCCCTACACCTCCCATACCAATTTGCTTTTCTCTTGTTTCTCCCCCTTCCCTTCCTTTCTTT
dot-bracket secondary structure
....(((.(((.((((..((((((...(((.((((((((((((((((((((((((...((((((((.((..((((...((.(((((....)))))))...
)))).)).))))))))....)))))))))))))..))))))))))).)))))))))..)))).)))..)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGTGAATGAATGGAAAAGGGAGACAAGATTAGGGGAAGGCGTTGGTATGGGGGGACTGGGAAGGAATGAATGAATGAATGAAGTCATGTGATTTGTGCC
TTCAATGCTTCTTCCCTACACCTCCCATACCAATTTGCTTTTCTCTTGTTTCTCCCCCTTCCCTTCCTTTCTTT
dot-bracket secondary structure
....(((.(((.((((..((((((...(((.((((((((((((((((((((((((...((((((((.((..((((...((.(((((....)))))))...
)))).)).))))))))....)))))))))))))..))))))))))).)))))))))..)))).)))..)))...
SIMILARITIES| miRBase gso-MIR482b: 0.000002 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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