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ABOUT THIS RECORD

ID: MNEST000172
species: Avena barbata
miRNA family: MIR2503
source: miRNEST

Taxonomy by NCBI:
Avena barbata Avena Aveninae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCGTCCTAAAATAAGTGACT

miRNA*
 TTACTTATTTCCGGACGGAGG

mismatches: 2
bulges: 0
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pre-miRNA
 GGAATGTGAGACTGTACTCCATCCGTCCTAAAATAAGTGACTTATGTTTTTCTAGATTCACACGTATCTATACACTAAAACACGTCTATATACATTCAAA
TCTAGACAAATGCAAGTTACTTATTTCCGGACGGAGGGAGTATATGTTTTGATCA

dot-bracket secondary structure
.((...((((((((((((((.(((((((..(((((((((((((.(((((.((((((((.....((((.((.((..........)).)).)))).....))
)))))).))))).)))))))))))))..))))))).)))))))).)))))).)).


SIMILARITIES
miRBase tae-MIR1128: 0.0001

PMRD tae-miR1128: 0.0001

microPC miR1128: 0.0001		UniProt no hits

RFAM MIR1122: 0.000009		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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