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ABOUT THIS RECORD
ID:
MNEST000205
species:
Barnadesia spinosa
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Barnadesia spinosa
Barnadesia
Barnadesioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTACA
miRNA*
ATTCTGGTGGTGCTGATGAAT
mismatches:
5
bulges:
0
View larger
pre-miRNA
CTCACTTTTCGAACAACAAGTG
ATTCTGGTGGTGCTGATGAAT
CGAGAAACGTTTTTAAAAGCAATTTCAAGTACTGTTCCATTTTAACCAAA
TCATCAT
CATCATCATCTACA
TTTGTTTTTGATTTTCGAC
dot-bracket secondary structure
........(((((.((((((((
....((((((((.((((((((
.(((....((.(((.(((....))).))).))..))).))..........
)))))).
))))))))....))
)))))))))))........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record