ABOUT THIS RECORDspecies: Barnadesia spinosa
miRNA family: MIRf1541
source: miRNEST
Taxonomy by NCBI:
Barnadesia spinosa Barnadesia Barnadesioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGGTGTTCGACGAAATTCCC miRNA* GTTTTCATCCAGTCCCTTTT mismatches: 4 bulges: 1 |
pre-miRNA
CANACGATCTGGGTTTTCATCCAGTCCCTTTTTGCAGTCGTCTTTGATTACCTTTTATGCCAAATGTGAGGAGATTAAGTTTGCACGGAAGGTGTTCGAC
GAAATTCCCATAAAATGT
dot-bracket secondary structure
.........((((.((((.((.(((.(((((((((((.....(((((((.((((.(((.....))).)))).))))))).))))).)))))).))).)).
))))..))))........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
CANACGATCTGGGTTTTCATCCAGTCCCTTTTTGCAGTCGTCTTTGATTACCTTTTATGCCAAATGTGAGGAGATTAAGTTTGCACGGAAGGTGTTCGAC
GAAATTCCCATAAAATGT
dot-bracket secondary structure
.........((((.((((.((.(((.(((((((((((.....(((((((.((((.(((.....))).)))).))))))).))))).)))))).))).)).
))))..))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
