ABOUT THIS RECORDspecies: Beta vulgaris
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Beta vulgaris Beta Amaranthaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATCA miRNA* ATGATGGGGGATGATGATGATG mismatches: 1 bulges: 1 |
pre-miRNA
TGATACCCAGATCATCATCATCATCATCATCATCTGTAGTAGCATCATCATCATCATCTGAGAAGCAGTCATCAGCTCCAGTGGAAATTCCTGATTGGTC
AAAAATTTATGGTAAGACATCAAAAAAGAAGAAGAATGGTACTATATCTTCATCATGGGTTGATTACAATGCTGTTAATCATGATGGGTATTATGGTAAT
GGTGGCAATGACCATCATCATCATCATCTAAATGGGTATTATGATGTTGGTGATGGGGATGATGATGGGGGATGATGATGATGA
dot-bracket secondary structure
..........((((((((((((.((((((((((((...((.(((((((.((((((((((((..((((((.((((((.(((.(((.((((...))))..))
)....(((.((((.....)))).))).((.(((((...........))))).)).))))))))).))..)))).....))).)))))......)))).))
))).)).))..(((((((((.((((((((.....))....)))))).)))))))))))))))))))))..))))))))))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGATACCCAGATCATCATCATCATCATCATCATCTGTAGTAGCATCATCATCATCATCTGAGAAGCAGTCATCAGCTCCAGTGGAAATTCCTGATTGGTC
AAAAATTTATGGTAAGACATCAAAAAAGAAGAAGAATGGTACTATATCTTCATCATGGGTTGATTACAATGCTGTTAATCATGATGGGTATTATGGTAAT
GGTGGCAATGACCATCATCATCATCATCTAAATGGGTATTATGATGTTGGTGATGGGGATGATGATGGGGGATGATGATGATGA
dot-bracket secondary structure
..........((((((((((((.((((((((((((...((.(((((((.((((((((((((..((((((.((((((.(((.(((.((((...))))..))
)....(((.((((.....)))).))).((.(((((...........))))).)).))))))))).))..)))).....))).)))))......)))).))
))).)).))..(((((((((.((((((((.....))....)))))).)))))))))))))))))))))..))))))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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