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ABOUT THIS RECORD
ID:
MNEST000252
species:
Brassica napus
miRNA family:
MIRf449
source:
miRNEST
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCTTTGCTTCCCCAATGCTG
miRNA*
GCTGAGGAGGTGGGGGAAC
mismatches:
2
bulges:
2
View larger
pre-miRNA
AGTGGCTGTAAAGGAGCACTCTTTCCATCTT
TTCTTTGCTTCCCCAATGCTG
TCTTAAGATCGTCTTCCTCGAGCTCGCTACCGGAATCGATGGGCTCGA
ACTCCTTGGCAACGGGATCATCGGTCGGCG
GCTGAGGAGGTGGGGGAAC
GTTGAGGGAGTCGTCCTGGATCATATGG
dot-bracket secondary structure
.((((......((((..((((((((.((..(
((((((((((((.(...((((
((....(((((...((((((((((((....((....)).)))))))))
......((....)))))....)))))))))
)).).))))))))))))).
)).))))))))..))))...))))....
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10984-akr
:
0.00000000001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record