miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000255
species: Brassica napus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTTCC

miRNA*
AAGACTTGAAGGTGAAGATA

mismatches: 4
bulges: 1

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pre-miRNA
GGTGGTAAGGATGAGATTGGGTAAGATTGTGGAAGACTTGAAGGTGAAGATAAAGACAAGTCTAAGGATGAGGAAGAGATCATCATTATCATCATCATCA
TCATCTTCC
TCTTCCTCAACTTCATCATCATCATCCTA


dot-bracket secondary structure
((((((...((((((.(((((.((((....((((((..(((.(((((.((((((((....)))...(((((........))))).))))).))))).)))
...))))))
)))).))))).))))))...))))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.0000000000005
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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