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ABOUT THIS RECORD
ID:
MNEST000256
species:
Brassica napus
miRNA family:
MIRf452
source:
miRNEST
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTGGACCGGTCCGGATTTCC
miRNA*
GAGTCTGGTCGTTGTAGCC
mismatches:
5
bulges:
1
View larger
pre-miRNA
CG
GCTGGACCGGTCCGGATTTCC
CGGGATATCGTCGACCCACGCGTCCGGTTTGAGTTTCCCCAA
GAGTCTGGTCGTTGTAGCC
dot-bracket secondary structure
.(
((((...(((.((((((((..
.((((..(((..((((.........)))))))...))))...
)))))))))))...)))))
SIMILARITIES
miRBase
no hits
PMRD
tae-miR166
:
0.00000000002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record