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ABOUT THIS RECORD

ID: MNEST000275
species: Brassica napus
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACA

miRNA*
 TGCTCACTGCTCTTTCTGTCAGA

mismatches: 1
bulges: 2
View larger
pre-miRNA
 AACATAGCAACTGACAGAAGAGAGTGAGCACACAAAGGTAATTTGCATATACTGCATTTACTTCTCTTGCGTGCTCACTGCTCTTTCTGTCAGAATCTAG
TG

dot-bracket secondary structure
..........(((((((((((((((((((((.(((((((((..((((.....)))).))))))...))).))))))))).))).))))))))).......
..


SIMILARITIES
miRBase bna-MIR156a: 4e-34

PMRD bna-miR156a: 4e-34

microPC miR156: 2e-33		UniProt no hits

RFAM mir-156: 7e-27		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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