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ABOUT THIS RECORD

ID: MNEST000277
species: Brassica napus
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACA

miRNA*
 TGCTCACTGCTTTATCTGTCAGA

mismatches: 1
bulges: 2
View larger
pre-miRNA
 TACAACGAATTTGACAGAAGAGAGTGAGCACACAAACGCACTTGCATGTTCGATGCACTTGCTTCTCTTGCGTGCTCACTGCTTTATCTGTCAGATTCCT
GCG

dot-bracket secondary structure
......(((((((((((((((((((((((((.(((..(((..(((((.....)))))..))).....))).))))))))).)))).))))))))))))..
...


SIMILARITIES
miRBase ath-MIR156c: 2e-33

PMRD ath-miR156c: 2e-33

microPC miR156: 0.00000000002		UniProt no hits

RFAM mir-156: 0.000000000000006		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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