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ABOUT THIS RECORD

ID: MNEST000286
species: Brassica napus
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTA

miRNA*
 GATCATGTTCGTAGTTTCACC

mismatches: 1
bulges: 0
View larger
pre-miRNA
 CCGGCATCTGATGAAGCTGCCAGCATGATCTAGTTAACTTTATTTCTCCGTTGTTTATCCATGACAATGGAAAAGGGATAAGTGTCGATTAGATCATGTT
CGTAGTTTCACCCGTTGACT

dot-bracket secondary structure
.(((...))).(((((((((.((((((((((((((.(((((((((((((((((((.......)))))))))...)))))))).)).))))))))))))))
.)))))))))..........


SIMILARITIES
miRBase bra-MIR167a: 8e-64

PMRD bra-miR167a: 8e-64

microPC miR167: 3e-51		UniProt no hits

RFAM MIR167_1: 1e-62		most similar mature miRNAs

Identical with: miR167 from microPC (MNEST045889)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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