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ABOUT THIS RECORD

ID: MNEST000293
species: Brassica napus
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 ACAGGGAACAAGCAGAGCATG

mismatches: 5
bulges: 0
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pre-miRNA
 ACCAGAGAGAGACAGGGAACAAGCAGAGCATGGATTGAGTTTTTACCAAAACATCAAATGACTATGTTTGGTCTCTTCCCATGCACTGCCTCTTCCCTGG
CTCCCTCCTC

dot-bracket secondary structure
....(((.(((.(((((((...((((.((((((...(((.....((((((.(((.........))))))))))))...)))))).))))...))))))).
))).)))...


SIMILARITIES
miRBase ath-MIR408: 2e-33

PMRD ath-miR408: 2e-33

microPC miR408: 0.00000002		UniProt no hits

RFAM MIR408: 8e-30		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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