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ABOUT THIS RECORD

ID: MNEST000297
species: Brassica napus
miRNA family: MIRf999
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGAAGATAGAGAGCACTAAG

miRNA*
 TCGTGCTCTCTATACTTCTGTC

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GAGTACGCGGGCAGAAGATAGAGAGCACTAAGGATGACATGCAAGTACATATGTATGTATCATCACACCGCCTGTGGATGATTACAAAAATAAAACCAAT
TCAAAAGAGAGAGAGAGAGCCTGCATGTCTACTCTTTCGTGCTCTCTATACTTCTGTCACCACCAT

dot-bracket secondary structure
.........(((((((((((((((((((.(((((.((((((((.((...(((...(((((((((.(((.....)))))))).))))...))).......(
((............))).)).))))))))...))))).))))))))))).))))))))........


SIMILARITIES
miRBase bna-MIR156b: 4e-54

PMRD bna-miR156b: 4e-54

microPC miR157: 2e-53		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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