miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000307
species: Brassica napus
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCTTCCTCTTCTTCTTCAT

miRNA*
 AGAGAATTGAAGAGGAGGAGGAA

mismatches: 3
bulges: 2
View larger
pre-miRNA
 GTATCCATCTTCCTCTTCCTCTTCTTCTTCATCATCATCATCATCCTCTTATGCACCTCCCTCGTCCTCTGGTTCAAGTGTCTCATTCGGTACTGCGTTC
ATAGTTCTAGCTGCAATCCTTGTCTTAGCAGCACTGGCTTGTGTGTTTGGAAGGCTATGCAACCGCGGACGCAAGGATCACAAAAACAACAACAAACCTT
CAAAGCATGAGAAACCGTCGTCAAAGAAGAGCCGTGAGATCAGACCCGTGGAACGTGAGCCGAGAGAGGGACGTGATGATTTGGAGTTTGGGTTTGATAT
AAAGCGTCCCGGTCCAATGAGCAAACCCTCTGGTCGAAACGGAGGAGATATTGAGCTTGGGTTTGATAACAAGAGAATTGAAGAGGAGGAGGAAAGAAAG
GA

dot-bracket secondary structure
...(((.((((((((((((((((((((((....((((...(((..(((.(((.(((.((((((...(((.((((((...((.((((..(((.(((..(((
((.(((((.(((((.............)))))...((.((((.(((((.((...((.(((..........))).)).))....)))))...)))).)).(
((.....)))((.....)).((...))))))).)))))..)))))).)))).)).))))))))).)))))).))).((..(((((..(((((..((....
....)).))))))))))....))...((((((.......))))))..)))..)))..)))...)))).....)))))..))))))))))))).))))..)
))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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