miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST000316
species:
Brassica napus
miRNA family:
MIRf102
source:
miRNEST
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCGGAATATACCGACGGAAT
miRNA*
TCCGTCGGAATATTCCGAGGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGGGTTTCCTCGAAATTTC
CTCGGAATATACCGACGGAAT
TCCGAGGAAATATCAA
TCCGTCGGAATATTCCGAGGA
AATTCCGAGGAAAAAT
dot-bracket secondary structure
....((((((((.((((((
((((((((((.((((((((..
................
)))))))).))))))))))))
)))).))))))))...
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11682-akr
:
0.00007
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record