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ABOUT THIS RECORD
ID:
MNEST000321
species:
Brassica oleracea var. alboglabra
miRNA family:
MIR1508
source:
miRNEST
Taxonomy by NCBI:
Brassica oleracea var. alboglabra
Brassica oleracea
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAGAAGGGGAAATAGCAGTAG
miRNA*
CATGCCTTCTTTTTTACTC
mismatches:
4
bulges:
2
View larger
pre-miRNA
ACCGGTTGAGA
GAGAAGGGGAAATAGCAGTAG
CCATTTTTTGCAGCTTCAATAGCCGCAATGATATTGTT
CATGCCTTCTTTTTTACTC
ACGAAACC
dot-bracket secondary structure
...((.(((((
(((((((.((....((((((.
.......((((.(((.....))).))))...)))))))
)...)))))))))))).))
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|P0ACZ7|EVGA_SHIFL: 0.0004
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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