miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000321
species: Brassica oleracea var. alboglabra
miRNA family: MIR1508
source: miRNEST

Taxonomy by NCBI:
Brassica oleracea var. alboglabra Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGAAGGGGAAATAGCAGTAG

miRNA*
CATGCCTTCTTTTTTACTC

mismatches: 4
bulges: 2

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pre-miRNA
ACCGGTTGAGAGAGAAGGGGAAATAGCAGTAGCCATTTTTTGCAGCTTCAATAGCCGCAATGATATTGTTCATGCCTTCTTTTTTACTCACGAAACC

dot-bracket secondary structure
...((.((((((((((((.((....((((((........((((.(((.....))).))))...))))))))...)))))))))))).))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P0ACZ7|EVGA_SHIFL: 0.0004

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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