miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000355
species: Cichorium intybus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACATCATCATCATCATCATCA

miRNA*
 GGGAACGTGATGAGATGGAG

mismatches: 4
bulges: 1
View larger
pre-miRNA
 CGTCGACATCAACATCATCATCATCATCATCATCATCATCACCGTCACGTTCCGGTGGTCTAGCGTGCGCGATAGCTGCCCTCGCGGAACGCCAACAAAT
CGTCGTCGTTAATACGTCCACCAAATACCACAACCACAACGGCAACACATCGGAATGCTACATAAGGCATCCCGAACACCGCGCCGCAATAAATACTCAT
CTTCGAGATTCACACTGGGACGACGAACACTACAACAGCGACCACCACTGCTGTTGCCATGAACAACAACTTATGGGTGAAAGTGGGACCTGATTTGGGT
ATCATGCCGGTGGTGGGGATGGGGAACGTGATGAGATGGAGAATGGCTA

dot-bracket secondary structure
.((((...((..((((.(((((((..((.(((((.(((((((((((.((((((((((.....(((.(((((....((((....)))).(((.........
))).((((((...........................))))))......((((.(((((......))))).))))....))))))))....(((.(((..
....))))))..))))))))))..)).(((..((((((((........))))))))((((((........)))))))))...((((.((((.....))))
.))))..))))))))).))))).))..)))))))))))..)).))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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