miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000356
species: Cichorium intybus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTATT

miRNA*
TAGGTTATGAAGTATGTGGATG

mismatches: 5
bulges: 1

View larger
pre-miRNA
AGTACGCTAGTAGGTTATGAAGTATGTGGATGTATTTGAATGAGAAAAAGTTAACATATGTATGCATATCATCATCATCATCATCATCATCATCATCTAT
T
GCAATAG


dot-bracket secondary structure
.....((.(((((((.((((...(((..((((....(((((((......((..((....))..))...))))..))).))))..)))..)))).))))))
)
)).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;