miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000361
species: Citrus aurantium
miRNA family: miR482a
source: miRNEST

Taxonomy by NCBI:
Citrus aurantium Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGTGGGAGCGTGGGGTAAGAA

miRNA*
CTTCCCTATGCCTCCCATTCC

mismatches: 0
bulges: 2

View larger
pre-miRNA
ATCTAGAAACAGAGGAGGAGGAGAGGAAGATTGAAGCTAGGAAGTTTTGGGAGTGGGAGCGTGGGGTAAGAAGAGAAGAAAGCGTATAATTTTTCTTTTC
TTTTTCAATTGAGAAAGAAAATTACAAATTCAATTTCTTCCCTATGCCTCCCATTCCTATGATTTCCTGCAGTTCCTTCCTCTCTTTATCATCTCTTCGT
CGACT


dot-bracket secondary structure
.....((....((((((((((((((((((...(((((.((((((((.(((((((((((((((((((.((((((.(((......(((.........(((((
((((((....))))))))))).)))...)))..))))))))))))).)))))))))))).))))))))))..)))))))))))))).....))))))).)
)....



SIMILARITIES
miRBase csi-MIR482a: 3e-40

PMRD gma-miR482: 0.00001

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;