ABOUT THIS RECORDspecies: Citrus reticulata
miRNA family: MIRf37
source: miRNEST
Taxonomy by NCBI:
Citrus reticulata Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTTGGTTCGGTTCGGTTTG miRNA* AAACCGAACCGAACAATAAACC mismatches: 3 bulges: 1 |
pre-miRNA
AAGTATTTTGGTTTTTGGTTCGGTTCGGTTTGATTATAAAAACCGATTGGATTAAAACCGAACCGAACAATAAACCCGATCGGT
dot-bracket secondary structure
......((.(((((...((((((((((((((((((..............)))).))))))))))))))...))))).)).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
AAGTATTTTGGTTTTTGGTTCGGTTCGGTTTGATTATAAAAACCGATTGGATTAAAACCGAACCGAACAATAAACCCGATCGGT
dot-bracket secondary structure
......((.(((((...((((((((((((((((((..............)))).))))))))))))))...))))).)).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
