miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000387
species: Citrus sinensis
miRNA family: MIR390
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCTCAGGAGGGATAGCGCC

miRNA*
 CGCTATCCATCCTGAGTTTCA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 CAAAAGTAAAGAAGAATCTGTTAAGCTCAGGAGGGATAGCGCCATGGGTGCCATGAATATGGGAATGATCTAGGGTTTCATGATAAATAATGGGCACTGGC
GCTATCCATCCTGAGTTTCATGGCTTCTTCTTACTCTC

dot-bracket secondary structure
)...(((((.((((((.((((.((((((((((.((((((((((...((((((.....(((((((...........)))))))..........)))))))))
))))))).)))))))))).)))).)))))))))))...


SIMILARITIES
miRBase csi-MIR390: 6.0E-74

PMRD ghr-miR390b: 3.0E-14

microPC miR390: 1.0E-50		UniProt no hits

RFAM 0MIR390: 1.0E-13		most similar mature miRNAs

Identical with: miR390 from microPC (MNEST046796)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;