miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST000395
species: Citrus sinensis
miRNA family: MIRf266
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
CCGGATCCGGATCCGGATGCA

miRNA*
CATCCGAATCCAGATCCGGAT

mismatches: 4
bulges: 0

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pre-miRNA
GAAACTTACATCCGGATCCGGATCCGGATGCACCTACATCCGAATCCAGATCCGGATTATGCCGA

dot-bracket secondary structure
.........(((((((((.((((.((((((......)))))).)))).)))))))))........

SIMILARITIES

miRBase no hits

PMRD ath-miRf10459-akr: 0.0007

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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