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ABOUT THIS RECORD

ID: MNEST000402
species: Citrus sinensis
miRNA family: MIR403
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTAGATTCACGCACAAACTCG

miRNA*
 GGTTTGTGCGTGAATTTAATA

mismatches: 0
bulges: 0
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pre-miRNA
 AATTCAAGGAGAGGCATGTTTCGGGTTTGTGCGTGAATTTAATAAAATAACCGCTTCTTTTAATCTCGTTCCCCCATTTTTTGTTAGTAACAAATTTTTGC
CGTCAGTGTTAGATTCACGCACAAACTCGTGATGTGTCTTTTCTTTTA

dot-bracket secondary structure
)....(((((((((((((((.(((((((((((((((((((((((.....((.((.........................((((((...)))))).....))
.))...))))))))))))))))))))))).)))))))))))))))...


SIMILARITIES
miRBase csi-MIR403: 1.0E-69

PMRD vvi-miR403c: 3.0E-8

microPC miR403: 3.0E-57		UniProt no hits

RFAM 3MIR403: 9.0E-9		most similar mature miRNAs

Identical with: miR403 from microPC (MNEST045432), csi-MIR403 from miRBase

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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