ABOUT THIS RECORDspecies: Citrus sinensis
miRNA family: MIR2910
source: miRNEST
Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGTTGGTGGAGCGATTTGTC miRNA* CAGCCTGCTAACTAGCTATG mismatches: 5 bulges: 1 |
pre-miRNA
ATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTNATTCCGTTACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTA
dot-bracket secondary structure
....((((...((((((((..((((..(((...((((..(((......)))...)))).)))..)))).)))))))).)))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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ATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTNATTCCGTTACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTA
dot-bracket secondary structure
....((((...((((((((..((((..(((...((((..(((......)))...)))).)))..)))).)))))))).)))).....
SIMILARITIES| miRBase no hits PMRD peu-miR2910: 5e-21 microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 2e-36 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
