ABOUT THIS RECORDspecies: Citrus sinensis
miRNA family: MIR395
source: miRNEST
Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGTGTTTGGGGGAACTC miRNA* GTTCCTCCGATCACTTCATT mismatches: 1 bulges: 0 |
pre-miRNA
GATGTCTCCGGGAGTTCCTCCGATCACTTCATTGGGGCTATATGATCATTTAGACAAAATTTGTCACCCCACTGAAGTGTTTGGGGGAACTCTGGGTGCC
AC
dot-bracket secondary structure
...((.(((((.(((((((((((.(((((((.(((((.((.((....)).))(((((...))))).))))).))))))).)))))))))))))))).)).
..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATGTCTCCGGGAGTTCCTCCGATCACTTCATTGGGGCTATATGATCATTTAGACAAAATTTGTCACCCCACTGAAGTGTTTGGGGGAACTCTGGGTGCC
AC
dot-bracket secondary structure
...((.(((((.(((((((((((.(((((((.(((((.((.((....)).))(((((...))))).))))).))))))).)))))))))))))))).)).
..
SIMILARITIES| miRBase csi-MIR395: 1e-52 PMRD ptc-miR395e: 0.000000001 microPC miR395: 0.00008 | UniProt no hits RFAM mir-395: 0.00000002 | most similar mature miRNAs |
Identical with: csi-MIR395 from miRBase (MNEST041240) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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