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ABOUT THIS RECORD

ID: MNEST000425
species: Citrus sinensis
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCC

miRNA*
AATGTTGTCTGGCTCGAGG

mismatches: 3
bulges: 0

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pre-miRNA
AGGGTTAATTGGGAAGCTTTTTCTTTTGAGGGGAATGTTGTCTGGCTCGAGGCCACTAACTAGATCTTTGATTTAATCTCAGTTGATCATATATTTGTTT
CATTTTTCTTCCATAAAATTTAATTATATTGAGATACCCATCATTGATCTTAAGATAATTAAGTTAGTGACGTCGGACCAGGCTTCATTCCCCCCAATAA
TTGCTTCTATCTGCTATGATA


dot-bracket secondary structure
..(((......((((((..((....(((.((((((((..((((((.((((...((((((((.((((.((((.......))))..))))....((((....
...............)))).(((((((.(((((((...........))))))).)))))))))))))))...)))).))))))..)))))))).))).))
..))))))....)))......



SIMILARITIES
miRBase ctr-MIR166: 8e-124

PMRD ptc-miR166a: 8e-16

microPC miR166: 8e-90
UniProt no hits

RFAM mir-166: 0.0000000000002
most similar mature miRNAs

Identical with: miR166 from microPC (MNEST044795)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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