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ABOUT THIS RECORD
ID:
MNEST000428
species:
Citrus sinensis
miRNA family:
miR166d
source:
miRNEST
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAATGTTGTCTGGCTCGAGG
miRNA*
TCGGACCAGGCTTCATTCCCC
mismatches:
4
bulges:
0
View larger
pre-miRNA
GGGGATCTTTTTGTTTTGAGG
GGAATGTTGTCTGGCTCGAGG
ACACTGCTTGTTGATCCATTAATTTTACGTATTCTCTCATAGATCTAGCATCTGAATG
GTGGATAACAATATACGGATTCAGCTTATTTGGCGTCG
TCGGACCAGGCTTCATTCCCC
CCAATATATTGCTTCCAT
dot-bracket secondary structure
..(((......(((.(((.((
((((((..((((((.((((.(
((...(((.((((((((............(((((..((((((((.....))))..)))
).))))).........))).)))))......)))))).
)))).))))))..))))))))
.))).))).....)))..
SIMILARITIES
miRBase
csi-MIR166e
:
4e-91
PMRD
cpt-miR166
:
4e-85
microPC
miR166
:
2e-74
UniProt
no hits
RFAM
mir-166: 0.0000000002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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