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ABOUT THIS RECORD
ID:
MNEST000439
species:
Citrus sinensis
miRNA family:
MIR482
source:
miRNEST
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTTCCCTACTCCACCCATGC
miRNA*
ATGGGTGAGTAGGGAAGATA
mismatches:
0
bulges:
1
View larger
pre-miRNA
CACGCGTCCGAGGGACTTGAAGGATATTGGGAAGGTTTTGGT
ATGGGTGAGTAGGGAAGATA
ATTTAACTAAGTAATAATAATATCACTTTTTTTATTAT
TACTATTTGCTTAAGGAATTTGTATA
TCTTCCCTACTCCACCCATGC
AATAGGTTTCCCATTATTCCTCCCTCTCCTTATCTCACC
dot-bracket secondary structure
.........((((((......(((((.(((((((.((...((
((((((((((((((((((((
.(((((.((((((.((((((((..........))))))
)).)))))).))))).........))
))))))))))).)))))))))
...)).))))))).))))).)))))).............
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
miR482
:
1e-38
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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