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ABOUT THIS RECORD

ID: MNEST000472
species: Coffea canephora
miRNA family: MIR444
source: miRNEST

Taxonomy by NCBI:
Coffea canephora Coffea Coffeeae Ixoroideae Rubiaceae Gentianales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGCTGCCTCAATCTTCCTCC

miRNA*
 GAGAAAAGTAGAGGTGCAAAA

mismatches: 3
bulges: 2
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pre-miRNA
 TTAAGCTGAAGTGAGAAAAGTAGAGGTGCAAAAGAAGCAAGGAGGGAAATCAAGAAAATGGCCCTTTCCATCAGTTGCTGCCTCAATCTTCCTCCTCCAC
CATC

dot-bracket secondary structure
......((.((.(((.((.((.(((((((((..((.....((((((..((.......))..))))))...))..)))).))))).)).)).))))).)).
....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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