miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000488
species: Cucumis melo subsp. melo
miRNA family: miR166d
source: miRNEST

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTCTGGCTCGAGG

miRNA*
 TCGGACCAGGCTTCATTCCCC

mismatches: 4
bulges: 0
View larger
pre-miRNA
 TTTGTTTTGAGGGGAATGTTGTCTGGCTCGAGGACACTTTTATTCGATCTTTTGATTTTTGTGTTTATATTTAGTGTCGTCGGACCAGGCTTCATTCCCC
CCAATTAAT

dot-bracket secondary structure
.(((..(((.((((((((..((((((.((((.((((((..(((.((...............))...)))...)))))).)))).))))))..))))))))
.))).))).


SIMILARITIES
miRBase csi-MIR166e: 0.000000000000006

PMRD cpt-miR166: 0.00000000000002

microPC miR166: 9e-45		UniProt no hits

RFAM mir-166: 0.000000000002		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;